DRSC/TRiP Functional Genomics Resources

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Protein Alignment trus and pdcd2

DIOPT Version :9

Sequence 1:NP_650205.1 Gene:trus / 41540 FlyBaseID:FBgn0038055 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002931535.1 Gene:pdcd2 / 100126680 XenbaseID:XB-GENE-959893 Length:369 Species:Xenopus tropicalis


Alignment Length:510 Identity:99/510 - (19%)
Similarity:160/510 - (31%) Gaps:213/510 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKNKSTVYLGY--EDEEVTAKQEQLLNSCTNKIGGTPDWPRHEVTIP-----SCPLCGAVRPLI 58
            ||.......||:  |.|....:..|.    .:|:||.|.| ..||.:|     .|.|||.....:
 Frog     9 MATASQVTELGFLQETEAWRLRSPQF----PSKVGGRPAW-LGEVGVPDPAALQCGLCGKPLAFL 68

  Fly    59 VQMYAPLDRSQFHRSLYVFGCMNPVCSQNSKSWCCVRTQHLDHQYEVISEHSPKATPTKKQN-SK 122
            :|:|||...| |||::::|.|.|..|.:.|::.|          ::|.....|:...|.... ..
 Frog    69 LQVYAPCPGS-FHRTIFIFCCRNGSCHRESETRC----------FKVYRNQLPRKNDTYSYGPPP 122

  Fly   123 KKGKSSGLQAISW-------------CSGAD------------------DWGDSSGGATEQAKTI 156
            :.|...|:..||:             |.|..                  ||       ..|.|.:
 Frog   123 ETGSPDGVGYISFELKCGLRLCRVCGCLGPKTCSKCHKVNYCSKEHQLMDW-------KLQHKKV 180

  Fly   157 SVALDEAMDITADDDQNERNGNVRPNALQYAKSDIQIDEPAKLEQVKIAADDDDDEDESTSLENE 221
            .....:...:|..|           :...:.:.:| :.||..:|    .....:||::.|..|::
 Frog   181 CNEKFDVSSVTVGD-----------HGFLFPEFEI-VTEPEDME----GDGKSEDEEDETVTEHD 229

  Fly   222 LISGFHQMDMISPQNADDDPNANCAAAAAPSLDGAGASAASAAIGAEIEGPETDLVLVDTPKKPE 286
                    ..|.|                            |.|...::|...|          |
 Frog   230 --------TQILP----------------------------AGIETSVDGLNLD----------E 248

  Fly   287 RDLIALLKHTSGALSQIKDLTLKSYYIAVDVENKTQAEEYENFGGALSMDHIRDLYQEYKLRDQN 351
            ::|.::.||                                                        
 Frog   249 QELESMAKH-------------------------------------------------------- 257

  Fly   352 PGQSPTGGASGPGEQGDENESYEKALPAHGDLVFHNFITTIHQNPGQLLRYSRDTIPLLVA---- 412
                               |:.|       |:||.||..:|...|.|:|||.|.:.||.::    
 Frog   258 -------------------ETKE-------DMVFSNFKKSIALEPEQVLRYCRGSDPLWISHRHI 296

  Fly   413 PFTEPLPKCQNCRGETICEVQLLPTLIPKLRFQVNGCNAPIEFGNVLVFTCLKSC 467
            |..:.:|.| :|..:...|.|::|.|:..|:  |:.....|::|.:.||||..:|
 Frog   297 PSEKDIPDC-SCGMKRQFEFQVMPQLLNHLK--VDSLGESIDWGVLAVFTCAANC 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trusNP_650205.1 PDCD2_C 371..482 CDD:282100 33/101 (33%)
pdcd2XP_002931535.1 zf-MYND 144..181 CDD:366792 6/43 (14%)
PDCD2_C 252..363 CDD:367865 35/182 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.040

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