DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18549 and srw-34

DIOPT Version :9

Sequence 1:NP_650203.3 Gene:CG18549 / 41538 FlyBaseID:FBgn0038053 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001023883.2 Gene:srw-34 / 3565702 WormBaseID:WBGene00005781 Length:380 Species:Caenorhabditis elegans


Alignment Length:172 Identity:43/172 - (25%)
Similarity:62/172 - (36%) Gaps:52/172 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 DNELEQKHTGCGQAIYALKSAGQLFLTKKMLLLSLAFFYTGLEL--SFFSGVFGSAIGFTTKIAE 261
            |..|:.|......|..|||::..:....        ||...:.|  :||     ..|..|.|...
 Worm    19 DFSLDSKDFWIAVATVALKTSEYVKYAN--------FFVAAIALIPNFF-----HLIVLTRKSMR 70

  Fly   262 T-PKEIVGLVGICIGAGEVFGGGLFGILGNKTTRYGRDPIVIAGYVMHMAAFFMTFINL--PNSA 323
            | |..|.           :||.||...     ||      :....||::...:.|:.||  |:..
 Worm    71 TMPIHIF-----------IFGIGLCDF-----TR------IALFLVMNIPQLWTTYQNLENPDCI 113

  Fly   324 PFKDTTDISYLDPPR---ASIAL-VC---AFLLGLGDACFNT 358
            |     .:||.:..|   .:||: ||   :..||:..|.|.|
 Worm   114 P-----PLSYFEMARNEFYTIAVSVCEQSSIWLGVVMAVFRT 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18549NP_650203.3 MFS_MFSD11 8..423 CDD:340965 43/172 (25%)
srw-34NP_001023883.2 TM helix 1 41..67 CDD:341315 7/38 (18%)
7TM_GPCR_Srw 44..350 CDD:370978 36/147 (24%)
TM helix 2 74..103 CDD:341315 9/50 (18%)
TM helix 3 125..154 CDD:341315 9/26 (35%)
TM helix 4 168..188 CDD:341315
TM helix 5 232..257 CDD:341315
TM helix 6 270..300 CDD:341315
TM helix 7 313..339 CDD:341315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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