DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18549 and srw-41

DIOPT Version :9

Sequence 1:NP_650203.3 Gene:CG18549 / 41538 FlyBaseID:FBgn0038053 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001023798.1 Gene:srw-41 / 3564767 WormBaseID:WBGene00005788 Length:377 Species:Caenorhabditis elegans


Alignment Length:389 Identity:74/389 - (19%)
Similarity:112/389 - (28%) Gaps:136/389 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 ESSTISRNSGVFW-----ALLQCSMFIGNL-----------------FVYYQFQDKTRIDKETRN 169
            |.:.|..|...||     .|:..:.:||.|                 .:..:...||.|:...  
 Worm    18 EFNDIQENYRGFWVTIYMTLVNLTQYIGVLNYIIAIVGLIANTLHIVILCQKIMRKTSINPFL-- 80

  Fly   170 LVIGVLTVIAVLGIVFLAALRFMADNAEHDNELEQKHTGCGQAIYALKSAGQLFLTKKMLLLSLA 234
            :.|||..::.....||..:|.:.|       |:.:..|    .:..|...     |...|||...
 Worm    81 IGIGVCDLLRTASFVFNVSLEYYA-------EIRKMRT----PVRCLSPT-----TYLELLLGNI 129

  Fly   235 FFYTGLELSFFSGVFG----------------------SAIGFT-------------------TK 258
            ||.......:.|..||                      ||||.|                   ||
 Worm   130 FFSISTSSQYLSVWFGVTMAIFRVFVVKYPLKAREKNLSAIGKTIVLVLAPTILPFWYLDYAQTK 194

  Fly   259 IAET-----PKEIVGLVGICIGAGEVFGGGLFGILGNKTTRYGRDPIVIAGYVMHMAAFFMTFI- 317
            |.:.     ||:       |.|....:....:..  ..|...|:..||....:..:...|...| 
 Worm   195 IRKNFKWVPPKD-------CDGFPPNYSQLWYST--ELTELSGKAGIVTTKIMFLVEGIFFKIIP 250

  Fly   318 ----------------NLPNSAPFKDTTDISYLDPPRASIALVCAFLLGLGDACFNTQIYSMLGG 366
                            .|..|:..|  .|.:|......||..:..|:.    ..|:..:|     
 Worm   251 SILLPIATIVLVVELRKLRKSSSRK--IDENYKSTQLVSIMTIAFFIA----TAFHGVLY----- 304

  Fly   367 EYVNNAVGAFALFKFTQSVAAAISFFYSSHFGLYVQLGILVVMGTIGTIAFVFVEWGFKRQHRE 430
                  :|.:.:|     ::|.:||........:..|.||  .||...:...|....:||..||
 Worm   305 ------IGKYIVF-----MSAGLSFIIEKLSMFFTLLSIL--NGTSHFLMCYFFSSQYKRATRE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18549NP_650203.3 MFS_MFSD11 8..423 CDD:340965 70/380 (18%)
srw-41NP_001023798.1 TM helix 1 44..68 CDD:320109 3/23 (13%)
7TM_GPCR_Srw 46..360 CDD:370978 66/361 (18%)
TM helix 2 77..99 CDD:320109 5/23 (22%)
TM helix 3 128..150 CDD:320109 5/21 (24%)
TM helix 4 172..185 CDD:320109 1/12 (8%)
TM helix 5 236..259 CDD:320109 2/22 (9%)
TM helix 6 280..305 CDD:320109 6/39 (15%)
TM helix 7 321..346 CDD:320109 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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