DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18549 and srw-33

DIOPT Version :9

Sequence 1:NP_650203.3 Gene:CG18549 / 41538 FlyBaseID:FBgn0038053 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_506844.1 Gene:srw-33 / 188958 WormBaseID:WBGene00005780 Length:378 Species:Caenorhabditis elegans


Alignment Length:427 Identity:81/427 - (18%)
Similarity:142/427 - (33%) Gaps:155/427 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NIEKTILDSISQEDDTFKGEGYTSLAIIYLFFSLSNWLAPSFISFTG--PRVAMVV-------GA 82
            |....:....|.||..|..|....||::.:.|::.::|    ||..|  |.:..::       ..
 Worm     2 NSSNDLYPGFSDEDIKFWTEIDELLAVLSILFNMLSFL----ISIIGILPTIFHIIVLSRKSMRT 62

  Fly    83 LTYTAFMI--------TFMFPSTVLLYVGSAVLGLGASITWTGQGTYLARCSESSTISRN--SGV 137
            ||..||::        ..||          .::.||...|     .:.:.......:|.|  |.:
 Worm    63 LTINAFLLGIGICDLARMMF----------IIMVLGPLYT-----EHFSHLEHPECMSPNYYSTI 112

  Fly   138 FWALLQCSMFIGNLFVYYQFQDKTRIDKETRNLVIGVLTVIAVL-GIVFLAALRFMADNAEHDNE 201
            .:||:  |.|.|.|..|               |.|.:...:|:: .:|....|     |:...:.
 Worm   113 LFALI--SGFTGKLVEY---------------LSIWLAVAMAIIRSLVIKYPL-----NSRISDL 155

  Fly   202 LEQKHTGCGQAIYALKSAGQLFL-TKKMLLLSLAFFY-----------------TGLELSFFSGV 248
            :|.|        |.::   .||| |..:::||:..::                 |....::|.  
 Worm   156 IESK--------YGIR---VLFLITLPIIILSIPKYFRYSIQPFGSLWVPPQNCTDFPKNYFQ-- 207

  Fly   249 FGSAIGFT---TKIAETPKEIVGLVGICIGAGEVFGGGLFGILGNKTTRYGRDPIVIAGYVMHMA 310
                |.:|   |.|.|...:              |..|:.|:|      |    ::|...::.::
 Worm   208 ----IQYTYVETHIFEKSTD--------------FLTGMEGVL------Y----VIIPSILLPIS 244

  Fly   311 AFFMTF---INLPNSAPFKDTTD--------------ISYL--DPPRASIALVCAFLLGLGDACF 356
            ...:.|   |:...|...:.|::              ||:.  ..|...:.||            
 Worm   245 TLILIFQLRISRKKSEALRHTSNSGGDRTTKLVTFMTISFTISTAPFGILHLV------------ 297

  Fly   357 NTQIYSMLGGEYVNNAVGAFA-LFKFTQSVAAAISFF 392
            ...:...:|.|.:|..|...| ||....::..||.||
 Worm   298 KVIVSEAIGSEGMNLIVDRIASLFPLIITINGAIHFF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18549NP_650203.3 MFS_MFSD11 8..423 CDD:340965 81/427 (19%)
srw-33NP_506844.1 TM helix 1 33..57 CDD:320109 6/27 (22%)
7TM_GPCR_Srw 36..354 CDD:370978 72/393 (18%)
TM helix 2 66..88 CDD:320109 4/31 (13%)
TM helix 3 111..138 CDD:320109 9/43 (21%)
TM helix 4 163..179 CDD:320109 6/18 (33%)
TM helix 5 223..246 CDD:320109 6/46 (13%)
TM helix 6 271..296 CDD:320109 3/24 (13%)
TM helix 7 311..340 CDD:320109 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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