DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18549 and srw-57

DIOPT Version :9

Sequence 1:NP_650203.3 Gene:CG18549 / 41538 FlyBaseID:FBgn0038053 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_506997.2 Gene:srw-57 / 185365 WormBaseID:WBGene00005804 Length:356 Species:Caenorhabditis elegans


Alignment Length:320 Identity:68/320 - (21%)
Similarity:98/320 - (30%) Gaps:101/320 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FLM-ILILGFGFMFVFTAFQTMCNIEKTILDSISQEDDTFKGEGYTSLAIIYLFFSLSNWLA--P 66
            ||: |.|..| ...:|.....:.|.......||..||.|                ...:||:  .
 Worm    71 FLIGIAICDF-LRLIFNVLVALSNYYHKYQTSIMPEDCT----------------PPKSWLSFFV 118

  Fly    67 SFISFTGPRV----AMVVGALTYTAFMITFMFPSTVLLYVGSAVLGLGASITWTGQGTYLARCSE 127
            |..|.|.||:    |:..|.......:|...:|                   ...:|..|.|.| 
 Worm   119 SVHSITIPRIFQKLAVCFGVAMAVLRVIILKYP-------------------LNRRGQNLKRSS- 163

  Fly   128 SSTISRNSGV------------FWAL-LQ---------------CSMFIG-NLFVYYQFQDKTRI 163
                   ||:            ||.. ||               |..|.. ||.:.|..: ....
 Worm   164 -------SGICILLIVCIPHIPFWFFDLQWTEIQENGIWKPPPGCENFNDHNLHIEYSVK-PGEY 220

  Fly   164 DKETRNLVIGVL-TVI--AVLGIVFLAALRFMADNAEHDNELEQKHTGCGQAIYALKSAGQLFLT 225
            ..||...:.||| |||  .:|.||....:.|.....:..:.....|......:..|.:...:..|
 Worm   221 SSETLLRIEGVLFTVIPSLILPIVTGTLIYFFKTLKKSTSSRNNDHNARSTIMVTLVAVTFVIAT 285

  Fly   226 KKMLLLSLA-FFYTGLELSFFSGVFGSAIGF----------------TTKIAETPKEIVG 268
            ..:||..|. |...|..|:||..:||:...|                :|:..:|.:|:.|
 Worm   286 FPLLLTYLVDFLSLGYRLAFFIILFGAFCEFVSLINGTLHFLLCAFISTQYQKTVREMFG 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18549NP_650203.3 MFS_MFSD11 8..423 CDD:340965 66/316 (21%)
srw-57NP_506997.2 7TM_GPCR_Srw 38..347 CDD:370978 68/320 (21%)
TM helix 1 41..60 CDD:320109
TM helix 2 69..91 CDD:320109 6/20 (30%)
TM helix 3 120..142 CDD:320109 6/21 (29%)
TM helix 4 164..179 CDD:320109 2/14 (14%)
TM helix 5 223..246 CDD:320109 11/22 (50%)
TM helix 6 268..293 CDD:320109 4/24 (17%)
TM helix 7 308..333 CDD:320109 3/24 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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