DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18549 and srw-29

DIOPT Version :9

Sequence 1:NP_650203.3 Gene:CG18549 / 41538 FlyBaseID:FBgn0038053 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_507151.2 Gene:srw-29 / 184965 WormBaseID:WBGene00005776 Length:361 Species:Caenorhabditis elegans


Alignment Length:229 Identity:47/229 - (20%)
Similarity:78/229 - (34%) Gaps:49/229 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 RVAMVVGALTYTAFMITFMFPSTVLLYVGSAVLGLGASITWTGQGTYLARCSESST-ISRNSGVF 138
            |:..|..:|.....:..|.||...|.|....    .|.:......|...|.||:|| ||.:    
 Worm   149 RLTQVEYSLKIIITITMFAFPIWALYYTKLC----SAKVPGWMPFTNCHRFSENSTKISID---- 205

  Fly   139 WALLQCSMFIGNLFVYYQFQDKTRIDKETRNLVIGVLTVIAVLGIVFLAALRFMADNAEHDNELE 203
               .|.:...|:..:|   :....|:.....|:..::..|..:|:|               .:|:
 Worm   206 ---FQINRLFGSTLIY---EIDLLIEGVLLELIPSIILPITTIGLV---------------KDLK 249

  Fly   204 QKHTGCGQAIYALKSAGQLFLTKKMLLLSLAFFYTGLE--LSFFSGVFGS----AIGFTTKIAET 262
            :..........:.||...|...|.:..::::|.:|...  |.:..|:|.:    .:....|.|..
 Worm   250 EAQKNSMSIKSSTKSHDTLRSIKLVTFMTISFLFTTTPHGLMYVIGMFNTDKPGLVMIILKFARL 314

  Fly   263 PKEIVGLVG-----ICI--------GAGEVFGGG 283
            ...:..|.|     ||.        .|.||||.|
 Worm   315 FTFLTTLNGIAHILICYLMSTQYRNTANEVFGEG 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18549NP_650203.3 MFS_MFSD11 8..423 CDD:340965 47/229 (21%)
srw-29NP_507151.2 7TM_GPCR_Srw 36..346 CDD:370978 44/225 (20%)
TM helix 2 66..92 CDD:341315
TM helix 3 110..140 CDD:341315
TM helix 4 154..185 CDD:341315 7/34 (21%)
TM helix 5 218..243 CDD:341315 4/27 (15%)
TM helix 6 265..295 CDD:341315 5/29 (17%)
TM helix 7 309..334 CDD:341315 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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