DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18549 and srw-36

DIOPT Version :9

Sequence 1:NP_650203.3 Gene:CG18549 / 41538 FlyBaseID:FBgn0038053 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_507224.2 Gene:srw-36 / 184481 WormBaseID:WBGene00005783 Length:297 Species:Caenorhabditis elegans


Alignment Length:235 Identity:49/235 - (20%)
Similarity:88/235 - (37%) Gaps:42/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TMCNIEKTILDSISQEDDTFKGEGYTSLAIIYLFFSLSNWLA---PSFISFTGPR--VAMVVGAL 83
            |..|||.:.|...|:|...:......:::.|.:|.|:.::|.   .|....|..:  :.:||..:
 Worm     5 TSVNIEGSPLQYPSRETKFYLHLINVAISFIGIFPSVFHFLVLLRKSMRQLTVNQFLIGIVVCGI 69

  Fly    84 TYTAFMITFMFPSTVLLYVGSAV----LGLGASITWTGQGTYLARCSESSTISRNSGVFWALLQC 144
            .:....|.:..|.....|....|    :...:|......|.|      ||.|:..:.|.......
 Worm    70 IHNVCSIIYYIPILCDHYYSLKVPLECVPSQSSYVKIAYGFY------SSLINSVAIVMITYFTA 128

  Fly   145 SM-FIGNLFVYYQFQDKTR---IDKETRNLVIGVLTVIAVLGIVFLAALR--------------- 190
            :| .|..|.:.:....:::   ..|....:::.::.||:...|:..|:|.               
 Worm   129 AMAIIRTLVIKFPLARRSKRLIYSKNGSKIMLTIILVISPFWIINFASLNVIETGVWVPPKNCNG 193

  Fly   191 FMADNAEHDNELEQKHTGC-GQAIYALKSAGQLFLTKKML 229
            |..:|.|....:||  ||. ||..|.:     .|||:.:|
 Worm   194 FSKNNIEKMYGIEQ--TGIFGQLFYLI-----FFLTETVL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18549NP_650203.3 MFS_MFSD11 8..423 CDD:340965 49/235 (21%)
srw-36NP_507224.2 7tm_GPCRs 28..>272 CDD:391938 42/212 (20%)
TM helix 2 57..82 CDD:341315 3/24 (13%)
TM helix 3 109..139 CDD:341315 9/35 (26%)
TM helix 4 153..169 CDD:341315 3/15 (20%)
TM helix 5 216..241 CDD:341315 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.