DRSC/TRiP Functional Genomics Resources

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Protein Alignment Desat2 and Scd2

DIOPT Version :9

Sequence 1:NP_650201.1 Gene:Desat2 / 41536 FlyBaseID:FBgn0043043 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_114029.1 Gene:Scd2 / 83792 RGDID:621177 Length:358 Species:Rattus norvegicus


Alignment Length:308 Identity:167/308 - (54%)
Similarity:217/308 - (70%) Gaps:2/308 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VDGDLTTDRFQLKRAEKRRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGML 92
            :..||....:|.:.....:|..|||||||.||:|:.||||: ::....|:.|.|||...|:|..|
  Rat    49 IKDDLYDPSYQDEEGPPPKLEYVWRNIILMALLHIGALYGI-TLVPSCKVYTCLFAYLYYVISAL 112

  Fly    93 GVTAGAHRLWAHRTYKAKWPLRLLLVIFNTIAFQDAVYHWARDHRVHHKYSETDADPHNATRGFF 157
            |:||||||||:||||||:.||||.|:|.||:|||:.||.||||||.|||:|||.|||||:.||||
  Rat   113 GITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFF 177

  Fly   158 FSHVGWLLCKKHPDIKEKGRGLDLSDLRADPILMFQRKHYYILMPLACFVLPTVIPMVYWNETLA 222
            ||||||||.:|||.:||||..||:|||:|:.::||||::|...:.|.||:|||::|...|.||..
  Rat   178 FSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPGLLLMCFILPTLVPWYCWGETFV 242

  Fly   223 SSWFVATMFRWCFQLNMTWLVNSAAHKFGNRPYDKTMNPTQNAFVSAFTFGEGWHNYHHAFPWDY 287
            :|..|:|..|:...||.|||||||||.:|.|||||.::..:|..||....|||:||||||||:||
  Rat   243 NSLCVSTFLRYAVVLNATWLVNSAAHLYGYRPYDKNISSRENILVSMGAVGEGFHNYHHAFPYDY 307

  Fly   288 KTAEWGCYSLNITTAFIDLFAKIGWAYDLKTVAPDVIQRRVLRTGDGS 335
            ..:|:. :.:|.||.|||..|.:|.|||.|.|:...:..|:.|||:.|
  Rat   308 SASEYR-WHINFTTFFIDCMALLGLAYDRKRVSKAAVLARIKRTGEES 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Desat2NP_650201.1 Delta9-FADS-like 76..317 CDD:239582 142/240 (59%)
FA_desaturase 81..284 CDD:278890 124/202 (61%)
Scd2NP_114029.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..43
Delta9-FADS-like 99..336 CDD:239582 141/237 (59%)
FA_desaturase 101..305 CDD:278890 125/203 (62%)
Histidine box-1. /evidence=ECO:0000305 119..124 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 156..160 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 297..301 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 292 1.000 Domainoid score I1461
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I2092
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm8949
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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