DRSC/TRiP Functional Genomics Resources

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Protein Alignment Desat2 and Scd4

DIOPT Version :9

Sequence 1:NP_650201.1 Gene:Desat2 / 41536 FlyBaseID:FBgn0043043 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_574671.7 Gene:Scd4 / 499358 RGDID:1563648 Length:381 Species:Rattus norvegicus


Alignment Length:331 Identity:170/331 - (51%)
Similarity:226/331 - (68%) Gaps:7/331 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HQDKSSRETGVLF--EDDAQTVDGDLTTDRFQLKRAEKRRLPLVWRNIILFALVHLAALYGLHSI 71
            |||  ..|| :.|  ||....:..|:....:|.:.....:|..||||||..||:|:.||||: ::
  Rat    54 HQD--GEET-IPFQSEDIRPEMREDIHDPSYQDEEGPPPKLEYVWRNIIFMALLHVGALYGI-TL 114

  Fly    72 FTRAKLATTLFAAGLYIIGMLGVTAGAHRLWAHRTYKAKWPLRLLLVIFNTIAFQDAVYHWARDH 136
            ....|:.|.|......|:..||:||||||||:||||||:.||||.|::.||:|||:.||.|||||
  Rat   115 VPSCKVYTWLLGIFYNIVAGLGITAGAHRLWSHRTYKARLPLRLFLIMANTMAFQNDVYEWARDH 179

  Fly   137 RVHHKYSETDADPHNATRGFFFSHVGWLLCKKHPDIKEKGRGLDLSDLRADPILMFQRKHYYILM 201
            |.|||:|||.|||||:.||||||||||||.:|||.:||||..||:|||:|:.::||||::|.:.:
  Rat   180 RAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKLAV 244

  Fly   202 PLACFVLPTVIPMVYWNETLASSWFVATMFRWCFQLNMTWLVNSAAHKFGNRPYDKTMNPTQNAF 266
            .|....|||::|..:|.|||..|..|:|..|:...||.|||||||||.:|::|||:::...:|..
  Rat   245 TLIFITLPTMVPWYFWGETLRHSLCVSTFLRYAVLLNFTWLVNSAAHLYGHQPYDRSIGARENPL 309

  Fly   267 VSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFAKIGWAYDLKTVAPDVIQRRVLRT 331
            ||..:.|||:||||||||:||..:|:. :.:|.||.|||..|.:|.|||.|.|:...:..||.||
  Rat   310 VSVASLGEGFHNYHHAFPYDYSVSEYR-WHINFTTFFIDCMAALGLAYDRKRVSKAAVLARVKRT 373

  Fly   332 GDGSHE 337
            |||||:
  Rat   374 GDGSHK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Desat2NP_650201.1 Delta9-FADS-like 76..317 CDD:239582 135/240 (56%)
FA_desaturase 81..284 CDD:278890 117/202 (58%)
Scd4XP_574671.7 Delta9-FADS-like 122..359 CDD:239582 134/237 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348773
Domainoid 1 1.000 292 1.000 Domainoid score I1461
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I2092
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm8949
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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