DRSC/TRiP Functional Genomics Resources

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Protein Alignment Desat2 and Scd1

DIOPT Version :9

Sequence 1:NP_650201.1 Gene:Desat2 / 41536 FlyBaseID:FBgn0043043 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_033153.2 Gene:Scd1 / 20249 MGIID:98239 Length:355 Species:Mus musculus


Alignment Length:318 Identity:169/318 - (53%)
Similarity:217/318 - (68%) Gaps:2/318 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LFEDDAQTVDGDLTTDRFQLKRAEKRRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAA 84
            |.||....:..|:....:|.:.....:|..|||||||..|:||..|||: .:....||.|.||..
Mouse    38 LEEDIRPEMKEDIHDPTYQDEEGPPPKLEYVWRNIILMVLLHLGGLYGI-ILVPSCKLYTCLFGI 101

  Fly    85 GLYIIGMLGVTAGAHRLWAHRTYKAKWPLRLLLVIFNTIAFQDAVYHWARDHRVHHKYSETDADP 149
            ..|:...||:||||||||:||||||:.|||:.|:|.||:|||:.||.||||||.|||:|||.|||
Mouse   102 FYYMTSALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADP 166

  Fly   150 HNATRGFFFSHVGWLLCKKHPDIKEKGRGLDLSDLRADPILMFQRKHYYILMPLACFVLPTVIPM 214
            ||:.||||||||||||.:|||.:||||..||:|||:|:.::||||::|...:.|.||:|||::|.
Mouse   167 HNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPGLLLMCFILPTLVPW 231

  Fly   215 VYWNETLASSWFVATMFRWCFQLNMTWLVNSAAHKFGNRPYDKTMNPTQNAFVSAFTFGEGWHNY 279
            ..|.||..:|.||:|..|:...||.|||||||||.:|.|||||.:...:|..||....|||:|||
Mouse   232 YCWGETFVNSLFVSTFLRYTLVLNATWLVNSAAHLYGYRPYDKNIQSRENILVSLGAVGEGFHNY 296

  Fly   280 HHAFPWDYKTAEWGCYSLNITTAFIDLFAKIGWAYDLKTVAPDVIQRRVLRTGDGSHE 337
            ||.||:||..:|:. :.:|.||.|||..|.:|.|||.|.|:...:..|:.|||||||:
Mouse   297 HHTFPFDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKATVLARIKRTGDGSHK 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Desat2NP_650201.1 Delta9-FADS-like 76..317 CDD:239582 140/240 (58%)
FA_desaturase 81..284 CDD:278890 121/202 (60%)
Scd1NP_033153.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 9..33
Delta9-FADS-like 93..333 CDD:239582 140/240 (58%)
FA_desaturase 98..301 CDD:278890 121/202 (60%)
Histidine box-1. /evidence=ECO:0000305 116..121 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 153..157 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 294..298 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845365
Domainoid 1 1.000 291 1.000 Domainoid score I1524
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74538
Inparanoid 1 1.050 369 1.000 Inparanoid score I2119
Isobase 1 0.950 - 0.837287 Normalized mean entropy S1208
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm8712
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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