DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and fadJ

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_416843.1 Gene:fadJ / 949097 ECOCYCID:G7212 Length:714 Species:Escherichia coli


Alignment Length:189 Identity:60/189 - (31%)
Similarity:95/189 - (50%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NITLIGINRP-QQRNAIDSLTASQLCDAFANF-EADDTSPVAVLYGVGGSFCSGFDILEISTDEK 118
            ||.:|.|:.| ::.|.:.:..|||:....... |..:...|..:.....:|.:|.||..|...:.
E. coli    15 NIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKT 79

  Fly   119 EEISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVM--EESAVLGFFNRRF 181
            .: ..:.|.|....:......:...|:..|:|.|:..||||||.|..||.  :...|||....:.
E. coli    80 AQ-EAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQL 143

  Fly   182 GVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNALELA 240
            |:.....||.|||.:||:|.||::||||:.:.:::|..:|||:.:||....|..|:|||
E. coli   144 GLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 60/189 (32%)
fadJNP_416843.1 fadJ 1..708 CDD:236864 60/189 (32%)

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