DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and caiD

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_414578.2 Gene:caiD / 948995 ECOCYCID:EG11557 Length:261 Species:Escherichia coli


Alignment Length:220 Identity:68/220 - (30%)
Similarity:112/220 - (50%) Gaps:8/220 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KNILVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCS-GFDI 110
            :::.:.::.:|..|.::|| :.||||:.|:.::.:.|.||..|....||::.|.|..|.| |:|:
E. coli     3 ESLHLTRNGSILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDL 66

  Fly   111 LEISTDEKEEISVDILMRPEGSVGPTR-RQIKKPVVCGINGYCIANGLELALMCDLRVMEESAVL 174
            ...:..|    :.|....|.|..|.|. ..:.|||:..:|||....|.||||..|..|..::|..
E. coli    67 KAAAEGE----APDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASF 127

  Fly   175 GFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNALEL 239
            .....:.|:.....|.:|||.::..:...::::|||.:|::||...|:|||:|.....:.||.||
E. coli   128 ALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNAREL 192

  Fly   240 ATCLAKFPQRALIHDRNSVYSSTFE 264
            |..|......| |.....:|.:|.|
E. coli   193 AQQLVNSAPLA-IAALKEIYRTTSE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 65/211 (31%)
caiDNP_414578.2 PRK03580 1..261 CDD:179599 68/220 (31%)

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