DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Srlp and fadB

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_418288.1 Gene:fadB / 948336 ECOCYCID:EG10279 Length:729 Species:Escherichia coli


Alignment Length:184 Identity:46/184 - (25%)
Similarity:77/184 - (41%) Gaps:19/184 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDILEISTDEK 118
            :..|..:..:.|...|.:|:.|.:.|.:|....|........:|.....:|..|.||.|.     
E. coli    14 EDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEF----- 73

  Fly   119 EEISVDILMRPE----------GSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESAV 173
                :.:.:.||          .||......:..|.:..:|||.:..|.|..|..|.|:......
E. coli    74 ----LSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134

  Fly   174 LGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIV 227
            :|....:.|:.....|::|:|.|:|...||::|..|:.||:.:|..||||:.:|
E. coli   135 IGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVV 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 46/184 (25%)
fadBNP_418288.1 fadB 1..715 CDD:183293 46/184 (25%)

Return to query results.
Submit another query.