DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and ECHID

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_176255.2 Gene:ECHID / 842350 AraportID:AT1G60550 Length:337 Species:Arabidopsis thaliana


Alignment Length:199 Identity:57/199 - (28%)
Similarity:91/199 - (45%) Gaps:34/199 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NILVEK--DKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVG-GSFCSGFD 109
            :|:.||  |:.|..|.||||::|||....|..:|..||.:...|.:..|.:|.|.| .:||||.|
plant    76 DIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAFCSGGD 140

  Fly   110 ILEISTDEKEEISVDILMRPEGSVGPTR-------------RQIKKPVVCGINGYCIANGLELAL 161
                          ..|...:|...|..             |::.|||:..:.||.:..|..|.:
plant   141 --------------QALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHM 191

  Fly   162 MCDLRVMEESAVLGFFNRRFGVPMLDA--GTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVN 224
            :|||.:..::|:.|....:.|  ..||  |:..:..::|..:|.::....|...:.||..:||:|
plant   192 VCDLTIAADNAIFGQTGPKVG--SFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEAEKMGLIN 254

  Fly   225 RIVP 228
            .:||
plant   255 TVVP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 57/198 (29%)
ECHIDNP_176255.2 PLN02921 7..337 CDD:178509 57/199 (29%)

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