DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and hibch

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001014338.1 Gene:hibch / 798364 ZFINID:ZDB-GENE-050327-29 Length:382 Species:Danio rerio


Alignment Length:364 Identity:87/364 - (23%)
Similarity:138/364 - (37%) Gaps:67/364 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FTAASRTFS--STKALHKDPATQEAEAAPPKNILVEKDKNITLIGINRPQQRNAIDSLTASQLCD 81
            ||:|.|..|  ..:.:|....:.:|.:    .:|.||.....:|.:|||:..||:.......:..
Zfish     6 FTSAQRLRSVCRLQRIHGHMMSSKAGS----EVLFEKVGKAGVITLNRPKALNALTLNMIRHIYP 66

  Fly    82 AFANFEADDTSPVAVLYGVG-GSFCSGFDILEISTDEKE-EISVDILMRPEGSVGPTRRQIKKPV 144
            ....::.|..:.:.::.|.| .:||:|.||..|:...|. .:...:..|.|..:..|....:||.
Zfish    67 QLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLSQVFFREEYILNNTIGTYQKPY 131

  Fly   145 VCGINGYCIANGLELALMCDLRVMEESAVLGFFNRRFGV-PMLDAGTI--RLPAMIGLSRALDLI 206
            |..|||..:..|:.|::....||..|..:........|: |.:..|..  ||...:||.    |.
Zfish   132 VALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLF----LA 192

  Fly   207 LTGRPVGSQEAHDIGLVNRIVPTGTALGNALELATCLAKFPQRALIHDRNSVYSSTFETSTFHQA 271
            |||..:..::...:|:....|.:...  .:||......|.|.   |.|...:..|..|.|  |  
Zfish   193 LTGFRLKGRDVQRVGVATHFVQSEKI--ESLEKDLVDLKSPS---ISDVAQLLDSYQEQS--H-- 248

  Fly   272 VQNEVMFTSREIIEDMQNGIKWFNQTFKPDTTHSWLKRDRSMADWDDEEVAEAAAQKEKLKQEQE 336
            :..|..|..:|..|.:                      ||..:....||:.      |.||::..
Zfish   249 LDAEKPFVLQEQTEAI----------------------DRLFSAGSVEEIV------ENLKKDGS 285

  Fly   337 A-ALAEAEKQKQAEKAQKRS--------KKTEESAAESV 366
            | ||      ||||...|.|        ::.||.|..|:
Zfish   286 AFAL------KQAETLAKMSPTSLKLTFRQIEEGARMSL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 52/214 (24%)
hibchNP_001014338.1 PRK05617 30..374 CDD:235533 81/340 (24%)
ECH_2 43..371 CDD:292731 77/323 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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