DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and cdyl

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_696879.5 Gene:cdyl / 568457 ZFINID:ZDB-GENE-070912-561 Length:581 Species:Danio rerio


Alignment Length:220 Identity:58/220 - (26%)
Similarity:108/220 - (49%) Gaps:12/220 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KNILVEKDKNIT-LIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDI 110
            ::|:|:|....| ::...:..:.|:::.....::..|.|...||| |.:.:|.|||..||.|.|.
Zfish   325 RDIVVKKQDGFTHILFSTKTSENNSLNPDVMKEVQSAMATAAADD-SKLVLLSGVGSVFCFGLDF 388

  Fly   111 LEI---STDEKEEISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESA 172
            :..   .||::::.|:.:.......|. |..|.|||::..:||..|..|..:..:||:....|.|
Zfish   389 IYFIRRLTDDRKKESIKMAETIRTFVN-TFIQFKKPIIAAVNGPAIGLGASILPLCDVIWANEKA 452

  Fly   173 VLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNAL 237
            ........||.......::..|.::|::.|.:::|:||.:.:|||...|||::::..||.....:
Zfish   453 WFQTPYTTFGQTPDACSSVTFPLIMGVASANEMLLSGRKLTAQEACAKGLVSQVLWPGTFTQEVM 517

  Fly   238 ----ELATC--LAKFPQRALIHDRN 256
                ||.:|  :.....:||:.:.|
Zfish   518 VRIKELVSCNSVVLRESKALVRNIN 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 58/218 (27%)
cdylXP_696879.5 CD_CDY 7..58 CDD:349284
Herpes_BLLF1 <73..297 CDD:282904
crotonase-like 327..523 CDD:119339 52/197 (26%)
Blue background indicates that the domain is not in the aligned region.

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