DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and echdc1

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001315065.1 Gene:echdc1 / 553585 ZFINID:ZDB-GENE-050522-370 Length:302 Species:Danio rerio


Alignment Length:296 Identity:67/296 - (22%)
Similarity:113/296 - (38%) Gaps:42/296 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AAPPKNILVEK--DKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFC 105
            |.|..::.::|  :..|.::.::.|.:.||.......:|.......|........::.|..|:||
Zfish    43 AFPGGSVELQKLQESGIAVLTVSNPARMNAFSGCMMLELEQRVNELEIWTEGKAVIVQGAAGNFC 107

  Fly   106 SGFDILEISTDEKEEISVDILMRPEGSVGPTRRQIKKPV--VCGINGYCIANGLELALMCDLRVM 168
            ||.|:..:.......   |.:...|.......|.::.|:  |..:.|..:..|.||...||.|:|
Zfish   108 SGSDLNAVRAIANPH---DGMKMCEFMQNTLARLLRLPLISVALVEGRALGGGAELTTACDFRLM 169

  Fly   169 EESAVLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTAL 233
            ...||:.|.::..|:.....|..||..:||...||.|:...|.|.......:|||:.::...:..
Zfish   170 TSDAVIQFVHKHMGLVPGWGGAARLVGIIGSRNALKLLSGARKVDPDYGKQMGLVDEVLQCSSGE 234

  Fly   234 GNALELATCLAKFPQRALIHDRNSVYSSTFETSTFHQAVQNEVMFTSREIIEDMQNGIKWFNQTF 298
            |              :||.|..:.:.......:...||:: :|:.:.||:..|            
Zfish   235 G--------------KALAHAEHWIAPFIKGPAPVIQAIK-KVVVSGRELSLD------------ 272

  Fly   299 KPDTTHSWLKRDRSM--ADWDDEEVAEAAAQKEKLK 332
                  ..||.:||:  ..|......||.|.|.|.|
Zfish   273 ------EALKCERSVFGTVWGGPANLEALASKPKHK 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 48/213 (23%)
echdc1NP_001315065.1 CaiD 55..297 CDD:440647 60/277 (22%)

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