DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and hibch

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001016188.1 Gene:hibch / 548942 XenbaseID:XB-GENE-947696 Length:385 Species:Xenopus tropicalis


Alignment Length:362 Identity:80/362 - (22%)
Similarity:134/362 - (37%) Gaps:70/362 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRKFGGLLAQQVGQQARFTAASRTFSSTKALHKDPATQEAEAAPPKNILVEKDKNITLIGINRPQ 66
            |:.||.|  |.:.|..|.|              :...::.|.      |:.|.....:|.:|||:
 Frog    12 LKVFGRL--QVIRQHLRMT--------------NHTVKDGEC------LLTKAGCAGVITLNRPK 54

  Fly    67 QRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGG-SFCSGFDILEISTDEK--EEISVDILMR 128
            ..||::......:......:|.|..:.:.::.|||| :||:|.||..::...|  :.::.| ..|
 Frog    55 ALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDRLAQD-FFR 118

  Fly   129 PEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESAVLGFFNRRFGV-PMLDAGTI- 191
            .|..:.......|||.|..|:|..:..|:.|::....||..|:.:........|: |.:..|.. 
 Frog   119 EEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFL 183

  Fly   192 -RLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNALELATCLAKFPQRALIHD- 254
             |||..:||.    |.|||..:...:....|:....|.:...  .:||......|.|.:..:.| 
 Frog   184 PRLPGKLGLY----LALTGFRLKGSDVQKAGIATHFVESEKI--PSLEQDLVAMKCPSKENVADV 242

  Fly   255 ----RNSVY----------------SSTFETSTFHQAVQNEVMFTSREIIEDMQNGIKWFNQTFK 299
                .|..|                :|.|..|:....::|.....|...::.:|.     ..|..
 Frog   243 LDSYHNKSYAAQDKPFVLAEHLDKINSLFSASSVEAIIENLRCDGSSFALKQLQT-----LSTMS 302

  Fly   300 PDT---THSWLKRDRSMADWDDEEVAEAAAQKEKLKQ 333
            |.:   |...||...||:      :.|....:.:|.|
 Frog   303 PTSLKITFRQLKEGSSMS------LQEVLTMEYRLSQ 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 54/220 (25%)
hibchNP_001016188.1 ECH_2 45..375 CDD:379770 69/307 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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