DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Srlp and Echdc2

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_081004.2 Gene:Echdc2 / 52430 MGIID:1289238 Length:296 Species:Mus musculus


Alignment Length:240 Identity:77/240 - (32%)
Similarity:114/240 - (47%) Gaps:35/240 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FSSTK--ALHKDPATQEAEAAPPKNILVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEA 88
            ||..:  |.|....|.|.:.    ..|...::.||.|.:|||..|||:.::..|:|.:|.|....
Mouse    17 FSGARDCASHATTRTPEIQV----QALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQLRE 77

  Fly    89 DDTSPVAVLY---GVGGSFCSGFDILEISTDEKEEISVDILMRPEGSVGPTRRQIK--------- 141
            |  ..|.||.   .|.|.||:|.|:     .|:|::| |:      .||...::::         
Mouse    78 D--QQVRVLLFRSAVKGVFCAGADL-----KEREQMS-DV------EVGTFVQRLRGLMSEIAAF 128

  Fly   142 -KPVVCGINGYCIANGLELALMCDLRVMEESAVLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDL 205
             .|.:..::|:.:..||||||.||||:...|||:|......|:.....||.|||..:|::.|.:|
Mouse   129 PVPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKEL 193

  Fly   206 ILTGRPVGSQEAHDIGLVNRIVPTGTALGNALELATCLAK--FPQ 248
            |.|||.:...:|.::||||..|........|...|..||:  .||
Mouse   194 IFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQEILPQ 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 71/215 (33%)
Echdc2NP_081004.2 crotonase-like 42..296 CDD:474030 70/211 (33%)

Return to query results.
Submit another query.