DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and echdc1

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_031757537.1 Gene:echdc1 / 496886 XenbaseID:XB-GENE-958554 Length:330 Species:Xenopus tropicalis


Alignment Length:187 Identity:52/187 - (27%)
Similarity:86/187 - (45%) Gaps:6/187 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDILEIS 114
            |.:.|..|..|.||.|.:.||.......:|.:..::.|........::||...:||||.|:..:.
 Frog    82 LSKMDNGIAEICINNPSRMNAFTGTMMIELEERISDLENWKNGKGLIVYGAENTFCSGSDLNAVK 146

  Fly   115 TDEKEEISVDILMRPEGSVGPTRRQIKKPV--VCGINGYCIANGLELALMCDLRVMEESAVLGFF 177
            .....:..:.:.|..:.::  ||.| :.|:  |..|.|..:..|.||...||.|:|.|.:.:.|.
 Frog   147 AISNPQEGMMMCMLMQNTL--TRLQ-RLPLISVALIQGKALGGGAELCTACDFRLMTEGSEIRFV 208

  Fly   178 NRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALG 234
            :::.|:.....|..||..:||...||.|:.....|..:.|.::||.:.|: .||..|
 Frog   209 HKQMGLVPGWGGAARLIHLIGSRHALKLLSGALRVHPENALELGLADNIL-LGTEDG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 52/187 (28%)
echdc1XP_031757537.1 CaiD 86..316 CDD:440647 51/183 (28%)

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