DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and echs1

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001005437.1 Gene:echs1 / 448019 XenbaseID:XB-GENE-5945792 Length:286 Species:Xenopus tropicalis


Alignment Length:265 Identity:75/265 - (28%)
Similarity:122/265 - (46%) Gaps:22/265 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ILVEK---DKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDI 110
            ||||:   ..|:.||.:|||:..||:.....:::..|...||.|......|:.|...:|.:|.||
 Frog    32 ILVERKGQHHNVGLIRLNRPKALNALCDGLMTEINQALDTFEEDPNIGAIVITGSERAFAAGADI 96

  Fly   111 LEISTDEKEEISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESAVLG 175
            .|:.....:|......:.....|.    .:||||:..:|||.:..|.|||:|||:....|.|   
 Frog    97 KEMQNRSFQECYGGNFLSHWNRVS----FVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKA--- 154

  Fly   176 FFNRRFGVPMLDAGTI-------RLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTAL 233
                .||.|.:..|||       ||...:|.|.|::::|:|..:.:|||...|||:::.|..:.:
 Frog   155 ----EFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLSGDRISAQEAQQAGLVSKVYPVDSVV 215

  Fly   234 GNALELATCLAKFPQRALIHDRNSVYSSTFETSTFHQAVQNEVMFTSREIIEDMQNGIKWFNQTF 298
            ..|:.....:|: ..:.::.......|:.||.|........:.:|.|....||.:.|:..|.:..
 Frog   216 DQAIICGEKIAR-NSKLIVSIAKEAVSAAFELSLAEGNRLEKRLFHSTFATEDRKEGMTAFVEKR 279

  Fly   299 KPDTT 303
            |.:.|
 Frog   280 KANFT 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 63/219 (29%)
echs1NP_001005437.1 crotonase-like 28..286 CDD:329030 75/265 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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