DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and eci2

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001002645.3 Gene:eci2 / 436918 ZFINID:ZDB-GENE-040718-392 Length:392 Species:Danio rerio


Alignment Length:313 Identity:72/313 - (23%)
Similarity:128/313 - (40%) Gaps:53/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKFGGLLAQQVGQQARFTAA-----SRTFSSTKALHKDPATQEAEAAPPKNILVEKDKNITLIGI 62
            :::..|::..||.:|...||     .:||                    :.:||..:.|||.|.:
Zfish   109 QQYVDLISSLVGAEAPAVAAQPTGGGKTF--------------------QTLLVSTEDNITTIRL 153

  Fly    63 NRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDILEISTDEKEEISVDILM 127
            |||.::|||.....::|.:|. .....|.|.:.|:.|.|..:|||.|:...:  :..|..|:.:.
Zfish   154 NRPDKKNAITVEMYNELIEAL-ELAGKDDSVITVMTGNGDYYCSGNDLNNFT--KIPEGGVEKMA 215

  Fly   128 RPEGSVGPTRRQIK------KPVVCGINGYCIANGLELALMCDLRVMEESAVLGFFNRRFGVPML 186
            :..|.:  .||.:|      ||::..|||..:...:.|..:.|:....|.|.       |..|..
Zfish   216 KDAGEL--LRRYVKAYIDFPKPLIGVINGPAVGVSVTLLGLFDVVYATEKAT-------FHTPFS 271

  Fly   187 DAG-------TIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNALELATCLA 244
            ..|       :...|.|:|.::|.:::|..:.:.:.:|.::|||:.:.|..:............|
Zfish   272 QLGQSPEGCSSYLFPKMMGAAKASEVLLFNKKLSATQACELGLVSEVFPESSFQSEVWSRLKAYA 336

  Fly   245 KFPQRALIHDRNSVYSSTFETSTFHQAVQNEV-MFTSREIIEDMQNGIKWFNQ 296
            |.|:.:|...:..:..  .|....|.....|| ..|.|.:.::....|..|.|
Zfish   337 KLPKNSLALSKQLIRG--LEKEKLHAVNDAEVERLTERWLSDECMQAIMSFFQ 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 55/222 (25%)
eci2NP_001002645.3 ACBP 39..123 CDD:238248 3/13 (23%)
crotonase-like 140..387 CDD:329030 63/260 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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