DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and Echdc1

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_006227808.3 Gene:Echdc1 / 361465 RGDID:1359654 Length:466 Species:Rattus norvegicus


Alignment Length:309 Identity:77/309 - (24%)
Similarity:137/309 - (44%) Gaps:29/309 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRKFGGLLAQQVGQQARFTAAS----RT---------FSSTKALHKDPATQEAEAAPPKNILVE 52
            :|...||.|.:...:.|:...||    ||         :::|...|::...:..|..|..:|.::
  Rat   153 ILEVSGGALRRYREEMAKSLLASSLSVRTKILQTGVSLYNTTHGFHEEEVKKILEQFPGGSIDLQ 217

  Fly    53 KDKN-ITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDILEISTD 116
            |.:| |.::.:|...:.||.......||.:.....|........:::|...:||||.|:..:...
  Rat   218 KKQNGIGILTLNNSNKMNAFSGAMMLQLLERVIELENWTEGKGLIVHGAKNTFCSGSDLNAVKAL 282

  Fly   117 EKEEISVDILMRPEGSVGPTRRQIKKPV--VCGINGYCIANGLELALMCDLRVMEESAVLGFFNR 179
            ...|..|.:.|..:.::   .|.::.|:  |..:.|:.:..|.||...||.|:|.|.:|:.|.::
  Rat   283 STPENGVALSMFMQNTL---TRFMRLPLISVALVQGWAMGGGAELTTACDFRLMTEESVIRFVHK 344

  Fly   180 RFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIV-PT--GTALGNALELAT 241
            ..|:.....|..||..:||..:||.::.....:.|:||..|||.:.:: |:  .|||..|.|...
  Rat   345 EMGIVPSWGGASRLVEIIGSRQALKVLSGTFKLDSKEALRIGLADEVLQPSDEATALEQAQEWLE 409

  Fly   242 CLAKFPQRALIHDRNSVYSSTFETSTFHQAVQNEVMFTSREIIEDMQNG 290
            .....|.:.:...:.||.|.  ......:|:|||     |:::|.:..|
  Rat   410 QFVSGPAQVIRGLKKSVCSG--RELYLEEALQNE-----RDVLETLWGG 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 55/215 (26%)
Echdc1XP_006227808.3 None

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