DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and Cdyl

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_017456089.1 Gene:Cdyl / 361237 RGDID:1549745 Length:617 Species:Rattus norvegicus


Alignment Length:204 Identity:56/204 - (27%)
Similarity:97/204 - (47%) Gaps:10/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KNILVEKDKNITLIGIN-RPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDI 110
            ::|:|.|....|.|.:: :..:.|:::.....::..|.:...||| |.:.:|..||..||.|.|.
  Rat   361 RDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADD-SKLVLLSAVGSVFCCGLDF 424

  Fly   111 LEI---STDEKEEISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESA 172
            :..   .||:::..|..:.......|. |..|.|||::..:||..|..|..:..:||:....|.|
  Rat   425 IYFIRRLTDDRKRESTKMAEAIRNFVN-TFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKA 488

  Fly   173 VLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNAL 237
            ........||.......|:..|.::|.:.|.:::|:||.:.:|||...|||:::...||.....:
  Rat   489 WFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVM 553

  Fly   238 ----ELATC 242
                |||:|
  Rat   554 VRIKELASC 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 56/202 (28%)
CdylXP_017456089.1 CD_CDY 56..105 CDD:349284
crotonase-like 363..559 CDD:119339 52/197 (26%)
Blue background indicates that the domain is not in the aligned region.

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