DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and echdc2

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_997953.1 Gene:echdc2 / 338247 ZFINID:ZDB-GENE-030219-147 Length:301 Species:Danio rerio


Alignment Length:208 Identity:67/208 - (32%)
Similarity:97/208 - (46%) Gaps:27/208 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NILVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYG-VGGSFCSGFDIL 111
            |.|...|..|..:.:.|.:.||::..:...|:.|..::.:.|....|.|... :.|.||:|.|:.
Zfish    42 NRLEGDDNGIVEVLMCRERARNSLGHVFVGQMRDLVSSLQHDSAVRVLVFRSLIPGVFCAGADLK 106

  Fly   112 E---ISTDEKE-------EISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLR 166
            |   :|..|.|       .:..||...|            .|.:..::|:.:..||||||.||||
Zfish   107 ERAQMSNAEAELFVHGLRSLMNDIAALP------------MPTIAAVDGFALGGGLELALACDLR 159

  Fly   167 VMEESAVLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVP--- 228
            .....|.:|......|:.....|:.|||..:|.:.|.:||.|||.||.::|.::|||||.||   
Zfish   160 TAAHCAQMGLIETTRGLLPGAGGSQRLPRTVGFAVAKELIFTGRRVGGEQAVNLGLVNRSVPQNQ 224

  Fly   229 TGTAL-GNALELA 240
            ||.|. ..||.||
Zfish   225 TGDAAHREALSLA 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 66/207 (32%)
echdc2NP_997953.1 crotonase-like 47..301 CDD:304874 65/203 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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