DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and Cdyl2

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_017456726.1 Gene:Cdyl2 / 292044 RGDID:1309548 Length:551 Species:Rattus norvegicus


Alignment Length:274 Identity:66/274 - (24%)
Similarity:117/274 - (42%) Gaps:64/274 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KNILVEKDKNITLIGI-NRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFD- 109
            ::|:|.|::..|.|.: ::....||:......::..|..|...|| |.:.:|..||..||||.| 
  Rat   295 RDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDD-SKLLLLSAVGSVFCSGLDY 358

  Fly   110 ---ILEISTDEKEEISVDILMRPEGSVGPTRR-------QIKKPVVCGINGYCIANGLELALMCD 164
               |..:|:|.::|.:         .:....|       |.|||:|..|||..:..|..:..:||
  Rat   359 SYLIGRLSSDRRKEST---------RIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCD 414

  Fly   165 LRVMEESAVLGFFNRRFGVPMLDAGTIRL----------PAMIGLSRALDLILTGRPVGSQEAHD 219
            :....|.|       .|..|.   .||||          |.::|::.|.:::..||.:.:|||..
  Rat   415 IVWASEKA-------WFQTPY---ATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACS 469

  Fly   220 IGLVNRIV-PT-------------GTALGNALELATCLAKFPQRALIHDRN--------SVYSST 262
            .|||:::. ||             .:.....||.:.||.:...::::.|.|        .::||:
  Rat   470 RGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEDSKCLVRSFLKSVLEDVNEKECLMLKQLWSSS 534

  Fly   263 FETSTFHQAVQNEV 276
            ....:....:|:::
  Rat   535 KGLDSLFSYLQDKI 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 63/253 (25%)
Cdyl2XP_017456726.1 CD_CDY 57..105 CDD:349284
crotonase-like 297..493 CDD:119339 57/215 (27%)
Blue background indicates that the domain is not in the aligned region.

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