DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and ech-1.1

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_506810.1 Gene:ech-1.1 / 180037 WormBaseID:WBGene00001150 Length:755 Species:Caenorhabditis elegans


Alignment Length:267 Identity:71/267 - (26%)
Similarity:126/267 - (47%) Gaps:39/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VEKDKNITLIGINRPQ-QRNAIDSLTASQLCDAFANFEADDT-SPVAVLYGVGGSFCSGFDILEI 113
            |||..::.::.|:.|. ..|.::....:::.:.....::|.: ..:.|:.|...||.:|.|| ::
 Worm    35 VEKQGDVAVMKIDLPNTTENVLNKALFAEMNETLDRLQSDQSVKAIVVMSGKPNSFVAGADI-QM 98

  Fly   114 STDEKEEISVDILMRPEGSVGPTRRQI------KKPVVCGINGYCIANGLELALMCDLR--VMEE 170
            ...||....|..|:| ||     ::|:      :||:|..|.|.|:..|||:||.|..|  |.::
 Worm    99 FKAEKTAAGVSNLLR-EG-----QKQLLTIELSQKPIVAAIMGSCMGGGLEIALACHYRIAVNDK 157

  Fly   171 SAVLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIV-PTG---- 230
            ..:||......|:...|.||.|||.:..:...|||.|||:.:.:.:|..||:|:|:: |.|    
 Worm   158 KTLLGLPEVTLGIMPGDGGTQRLPKLTTVQNVLDLTLTGKRIKANKAMKIGIVDRVIQPLGDGIC 222

  Fly   231 ------------TALGNALELATCLAKFPQRALIHDRNSVYSSTFETSTFHQAVQNEVMFTSREI 283
                        .|:.:|.|||....|     :..|:..|:::|....|....:.|.::..::..
 Worm   223 TSTETTHKYLEEIAVQSARELANGKLK-----INRDKGFVHNATQAVMTSKFVLDNVILKMAKNK 282

  Fly   284 IEDMQNG 290
            :..:.||
 Worm   283 LIKLTNG 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 65/234 (28%)
ech-1.1NP_506810.1 fa_ox_alpha_mit 20..754 CDD:131494 71/267 (27%)
crotonase-like 34..216 CDD:119339 56/187 (30%)
3HCDH_N 355..533 CDD:280833
3HCDH 535..630 CDD:279114
3HCDH 668..754 CDD:279114
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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