DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and ech-3

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_505066.1 Gene:ech-3 / 179180 WormBaseID:WBGene00001152 Length:258 Species:Caenorhabditis elegans


Alignment Length:251 Identity:110/251 - (43%)
Similarity:155/251 - (61%) Gaps:5/251 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ILVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDILEI 113
            :...:|..:.||||||..::|.::..||.||.|||..|..|.|...|||||.||:||:|:|:..:
 Worm     7 VKTRQDGPVFLIGINRANKKNCVNHATALQLIDAFEKFNEDSTMKTAVLYGEGGTFCAGYDLESV 71

  Fly   114 STDEKEEISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESAVLGFFN 178
            |..|.:|:|.|...:.. .:||:..:||||::..|.|:.:|.||||:||.||||...||..|.|.
 Worm    72 SKAEHQEVSEDFCDKYR-YMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGVFC 135

  Fly   179 RRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNALELATCL 243
            ||.|||::|.||:|||.:|||.||||:|||||.||:|||...||||||...|.|:..|::|...:
 Worm   136 RRVGVPLIDGGTVRLPRVIGLGRALDMILTGREVGAQEALQWGLVNRISDEGKAVEEAVKLGKLI 200

  Fly   244 AKFPQRALIHDRNSVYSSTFETSTFHQAVQNEVMFTSREIIEDMQNGIKWFNQTFK 299
            |..|:..::.||.|.|.|...|.  |::.:.|  |.|.:::.:...|.:.|.:..|
 Worm   201 ASHPEICMLADRESTYYSLEHTE--HESFEYE--FGSTKVLAESIKGAQQFMEKQK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 100/209 (48%)
ech-3NP_505066.1 crotonase-like 7..247 CDD:304874 108/244 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167282
Domainoid 1 1.000 200 1.000 Domainoid score I1767
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44730
Inparanoid 1 1.050 201 1.000 Inparanoid score I2463
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56076
OrthoDB 1 1.010 - - D1234730at2759
OrthoFinder 1 1.000 - - FOG0009134
OrthoInspector 1 1.000 - - otm14619
orthoMCL 1 0.900 - - OOG6_108084
Panther 1 1.100 - - LDO PTHR43802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17021
SonicParanoid 1 1.000 - - X5949
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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