DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srlp and ech-3

DIOPT Version :10

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_505066.1 Gene:ech-3 / 179180 WormBaseID:WBGene00001152 Length:258 Species:Caenorhabditis elegans


Alignment Length:251 Identity:110/251 - (43%)
Similarity:155/251 - (61%) Gaps:5/251 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ILVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVLYGVGGSFCSGFDILEI 113
            :...:|..:.||||||..::|.::..||.||.|||..|..|.|...|||||.||:||:|:|:..:
 Worm     7 VKTRQDGPVFLIGINRANKKNCVNHATALQLIDAFEKFNEDSTMKTAVLYGEGGTFCAGYDLESV 71

  Fly   114 STDEKEEISVDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESAVLGFFN 178
            |..|.:|:|.|...:.. .:||:..:||||::..|.|:.:|.||||:||.||||...||..|.|.
 Worm    72 SKAEHQEVSEDFCDKYR-YMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGVFC 135

  Fly   179 RRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIVPTGTALGNALELATCL 243
            ||.|||::|.||:|||.:|||.||||:|||||.||:|||...||||||...|.|:..|::|...:
 Worm   136 RRVGVPLIDGGTVRLPRVIGLGRALDMILTGREVGAQEALQWGLVNRISDEGKAVEEAVKLGKLI 200

  Fly   244 AKFPQRALIHDRNSVYSSTFETSTFHQAVQNEVMFTSREIIEDMQNGIKWFNQTFK 299
            |..|:..::.||.|.|.|...|.  |::.:.|  |.|.:::.:...|.:.|.:..|
 Worm   201 ASHPEICMLADRESTYYSLEHTE--HESFEYE--FGSTKVLAESIKGAQQFMEKQK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 100/209 (48%)
ech-3NP_505066.1 crotonase-like 7..247 CDD:474030 108/244 (44%)

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