DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Srlp and ECI1

DIOPT Version :9

Sequence 1:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001910.2 Gene:ECI1 / 1632 HGNCID:2703 Length:302 Species:Homo sapiens


Alignment Length:289 Identity:65/289 - (22%)
Similarity:108/289 - (37%) Gaps:67/289 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KNILVEKD--KNITLIGINRPQQRNAIDSLTASQLCDAFANFE--ADDTS--PVAVLYGVGGSFC 105
            :.:|||.|  ..:.::....|    .::||:...|.:...:.|  .:|.|  .|.:.....|.|.
Human    45 QRVLVEPDAGAGVAVMKFKNP----PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFS 105

  Fly   106 SGFDILEISTDEKEEIS------VDILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCD 164
            :|.|:.|:........:      .::.:|        ..|....:|..|||.|.|.|..:||.||
Human   106 AGLDLTEMCGRSPAHYAGYWKAVQELWLR--------LYQSNLVLVSAINGACPAGGCLVALTCD 162

  Fly   165 LRVMEESA--VLGFFNRRFGV--PMLDAGTIRLPAMIG---LSRALDLILTGRPVGSQEAHDIGL 222
            .|::.::.  .:|....:.|:  |.....|  |...||   ..|||.|.|...|.   ||..:|:
Human   163 YRILADNPRYCIGLNETQLGIIAPFWLKDT--LENTIGHRAAERALQLGLLFPPA---EALQVGI 222

  Fly   223 VNRIVPTGTALGNALELATCLAKFPQRA---------------LIHDRNSVYSSTFETSTFHQAV 272
            |:::||.......||.........|..|               |:..|::             .|
Human   223 VDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDA-------------DV 274

  Fly   273 QNEVMFTSREIIEDMQNGIKWFNQTFKPD 301
            ||.|.|.|::.|   |..::.:.:..|.:
Human   275 QNFVSFISKDSI---QKSLQMYLERLKEE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 56/243 (23%)
ECI1NP_001910.2 ECH_1 52..298 CDD:306810 61/278 (22%)
Substrate binding. /evidence=ECO:0000269|PubMed:15351645, ECO:0007744|PDB:1SG4 106..110 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.