DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aos1 and Uba3

DIOPT Version :10

Sequence 1:NP_650198.1 Gene:Aos1 / 41532 FlyBaseID:FBgn0029512 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_476553.1 Gene:Uba3 / 117553 RGDID:621084 Length:462 Species:Rattus norvegicus


Alignment Length:336 Identity:66/336 - (19%)
Similarity:115/336 - (34%) Gaps:105/336 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LRTAKILIAGLCGLGAEITKNIILSGVNSVKLLDDKDVTEEDFCSQFLVPRESLNTNRAEASLTR 101
            |.|.|:|:.|..|||.|:.||:.|||...:.::|...:...:...|||...:.:...:||.:   
  Rat    67 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVA--- 128

  Fly   102 ARALN---PMVDISADREPLKEKTSEFFGQFDVVV-----------VNGATNEELLRIDTICRDL 152
            |..||   |..::......:::....|:.||.::|           :||      :.|..:..:.
  Rat   129 AEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWING------MLISLLNYED 187

  Fly   153 GV----KFIATDVWGTFGF-------------------------------YFASLQKHSYVEDVI 182
            ||    ..:.....||.||                               ..||:.:  ..|..|
  Rat   188 GVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPR--LPEHCI 250

  Fly   183 KHKVVANSEKKKKYETVSIPTQRDVDYPGYSAWLDFDVTEPSYLRKLKRNGPGVLLLSVLQKFRT 247
            ::..:....|::.:.. .:|.  |.|.|.:..|:                            |:.
  Rat   251 EYVRMLQWPKEQPFGD-GVPL--DGDDPEHIQWI----------------------------FQK 284

  Fly   248 THKRDPSYKTREADLELLRGIRDELLPNSILGDEALGLIFAQISPAVAVVGGVVAQEVIKVVTKL 312
            :.:|...|..|.....|.:|:...::|              .::...||:..|.|.||.|:.|..
  Rat   285 SVERASQYNIRGVTYRLTQGVVKRIIP--------------AVASTNAVIAAVCATEVFKIATSA 335

  Fly   313 EAPHRNLFVFD 323
            ..|..|..||:
  Rat   336 YIPLNNYLVFN 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aos1NP_650198.1 Aos1_SUMO 19..>172 CDD:238769 38/183 (21%)
Uba3NP_476553.1 Interaction with UBE2M N-terminus. /evidence=ECO:0000250 53..70 1/2 (50%)
Uba3_RUB 71..368 CDD:238765 64/332 (19%)
Interaction with UBE2M N-terminus. /evidence=ECO:0000250 157..161 2/3 (67%)
Interaction with UBE2M N-terminus. /evidence=ECO:0000250 192..217 4/24 (17%)
Interaction with NEDD8. /evidence=ECO:0000250 227..229 0/1 (0%)
Interaction with NAE1. /evidence=ECO:0000250 242..248 0/7 (0%)
Interaction with NAE1. /evidence=ECO:0000250 292..295 1/2 (50%)
Interaction with UBE2M N-terminus. /evidence=ECO:0000250 331..338 1/6 (17%)
Interaction with NEDD8. /evidence=ECO:0000250 352..357
Interaction with UBE2M core domain. /evidence=ECO:0000250 368..462
E2_bind 376..461 CDD:462611
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.