DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and PRE8

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_013618.1 Gene:PRE8 / 854882 SGDID:S000004557 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:249 Identity:135/249 - (54%)
Similarity:168/249 - (67%) Gaps:18/249 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEM 67
            |:|||||||||||||||.|::|||.||..|..|:||.|:||||||||.|..|||....::.:|.:
Yeast     2 TDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSL 66

  Fly    68 IYNHIGMVYSGMGPDYRLLVKQARKIAQT-YYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFG 131
            :...||.||||||||||:||.::||:|.| |...|.|..|...||..||.:|||.||||||||||
Yeast    67 LTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFG 131

  Fly   132 VSLLICGWDNDRPY-LYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTL 195
            |||||.|.|....: |||.||||:||.|||||:||.:|..|||||||::::|||:||:|.|:|||
Yeast   132 VSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTL 196

  Fly   196 KEGFEGKMTADNIEIGIC-DQN---------------GFQRLDPASIKDYLASI 233
            ||..||:...|.||:.|. |:|               .|::|....|.|.|.::
Yeast   197 KESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTSQEINDRLEAL 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 132/242 (55%)
PRE8NP_013618.1 proteasome_alpha_type_2 5..247 CDD:239719 132/241 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343121
Domainoid 1 1.000 200 1.000 Domainoid score I562
eggNOG 1 0.900 - - E1_KOG0181
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2081
Inparanoid 1 1.050 243 1.000 Inparanoid score I679
Isobase 1 0.950 - 0 Normalized mean entropy S257
OMA 1 1.010 - - QHG54016
OrthoFinder 1 1.000 - - FOG0003690
OrthoInspector 1 1.000 - - oto99075
orthoMCL 1 0.900 - - OOG6_101969
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1004
SonicParanoid 1 1.000 - - X2555
TreeFam 1 0.960 - -
1615.740

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