DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and PRE6

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_014604.1 Gene:PRE6 / 854119 SGDID:S000005398 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:234 Identity:91/234 - (38%)
Similarity:133/234 - (56%) Gaps:7/234 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQH-SVHRVEMIY 69
            |..:|:.|||.|.:.|:||||.||..|..:||:...|.||:..|.:....|.:.. :..:|..|.
Yeast     4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKID 68

  Fly    70 NHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSL 134
            :|:.:.:||:..|.|:|:::||..||::.||.::|:.|..|.:.||.:.|.|||||||||||||.
Yeast    69 SHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVST 133

  Fly   135 LICGWD--NDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAI-LTLK 196
            ||.|:|  :|.|.|||::|||.|.:|.|..:|:|:...:.||||.|... |....|...: ||::
Yeast   134 LIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRK-EPPATVEECVKLTVR 197

  Fly   197 EGFEGKMT-ADNIEIGIC-DQNGFQRLDPASIKDYLASI 233
            ...|...| |.||||.:. ..:....|....|..|:..|
Yeast   198 SLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQI 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 90/230 (39%)
PRE6NP_014604.1 proteasome_alpha_type_7 4..215 CDD:239724 87/211 (41%)

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