DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and SCL1

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_011504.3 Gene:SCL1 / 852873 SGDID:S000002979 Length:252 Species:Saccharomyces cerevisiae


Alignment Length:239 Identity:69/239 - (28%)
Similarity:115/239 - (48%) Gaps:13/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNG---VVIATENKHKSPLYEQHSVHRVEM 67
            |...:|.|||.|:|.|:|||..|.:  ..::..:|..|   .|:.::.|....|.:..:|..:..
Yeast    12 YDRHITIFSPEGRLYQVEYAFKATN--QTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFC 74

  Fly    68 IYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGV 132
            |...||||.:|..||.|....:|:..|..:...|...:|...|.:|:|.|.|.|||...:||.||
Yeast    75 ISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGV 139

  Fly   133 SLLICGWDND-RPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSE-------DLELDDAVH 189
            .|.....|.: .|.:|::||:|.|..:||||.|.......|.||..:.:       :...:..|.
Yeast   140 ILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVE 204

  Fly   190 TAILTLKEGFEGKMTADNIEIGICDQNGFQRLDPASIKDYLASI 233
            .||..:.:....:.:.:::|:|:..::.|..|...:|::.|.:|
Yeast   205 FAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAENIEERLVAI 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 67/235 (29%)
SCL1NP_011504.3 proteasome_alpha_type_6 12..228 CDD:239723 64/217 (29%)

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