DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and psma6l

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:236 Identity:69/236 - (29%)
Similarity:116/236 - (49%) Gaps:12/236 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTTFSPSGKLVQLEYALAAVS-GGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIG 73
            :|.|||.|:|.|:|||..|:| .|..:|||...:..|:.|:.|....|.:..::..:..|...||
Zfish    13 ITIFSPEGRLYQVEYAFKAISQSGLTTVGIRGVDCAVLVTQKKVSDTLLDASTMTNMFRITPRIG 77

  Fly    74 MVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICG 138
            .|.:|...|.|..|.:||..|..:...:...:||..|.:|:|.|.|.|||:..:||.|..:::..
Zfish    78 CVMTGHYADSRSQVHRARIEAGEWKYKFGYDVPVDALCRRLADLSQVYTQNAEMRPLGCCMMLIS 142

  Fly   139 WDNDR-PYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSE--------DLELDDAVHTAILT 194
            .|..: |.||:.||:|.:..::||::|.......::|||:..:        :|:.|.:|..||..
Zfish   143 MDPQKGPMLYKCDPAGYFCGFRATSVGVKHTEANSYLEKKIKKMQKKKEEVELDFDSSVQMAISC 207

  Fly   195 LKEGFEGKMTADNIEIGICDQNG--FQRLDPASIKDYLASI 233
            |............:|:.:..:..  |:.|....|:.:|.:|
Zfish   208 LSSVLCMDFKCTELEVAVVTKENPKFRTLSEVEIERHLVAI 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 67/232 (29%)
psma6lNP_571870.2 proteasome_alpha_type_6 8..226 CDD:239723 64/212 (30%)

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