DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and PAD2

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_201415.1 Gene:PAD2 / 836746 AraportID:AT5G66140 Length:250 Species:Arabidopsis thaliana


Alignment Length:235 Identity:95/235 - (40%)
Similarity:141/235 - (60%) Gaps:11/235 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIY 69
            ||..::|.|||.|.|.|:||||.||..|..:||:..::.||:|.|.|....|.:..|..::..:.
plant     3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLD 67

  Fly    70 NHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSL 134
            |||.:..:|:..|.|:|:.:||...|::.||.::|:.|..:.:.:|.|.|:|||||||||||:|.
plant    68 NHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132

  Fly   135 LICGWD--NDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKE 197
            ||.|:|  :..|.|||:||||.:.||||.|.|:|:.:.:.||||.|.|. ...:.:..||..|.|
plant   133 LIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-SGQETIKLAIRALLE 196

  Fly   198 GFE--GKMTADNIEIGIC--DQNGFQRLDPASIKDYLASI 233
            ..|  ||    |||:.:.  ::.|.::|:.|.|...:|.|
plant   197 VVESGGK----NIEVAVMTREETGLRQLEEAEIDAIVAKI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 92/230 (40%)
PAD2NP_201415.1 proteasome_alpha_type_7 4..210 CDD:239724 88/210 (42%)

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