DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha2 and PAA1

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_198409.1 Gene:PAA1 / 833524 AraportID:AT5G35590 Length:246 Species:Arabidopsis thaliana


Alignment Length:234 Identity:82/234 - (35%)
Similarity:124/234 - (52%) Gaps:6/234 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YSFSLTTFSPSGKLVQLEYALAAV-SGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIY 69
            |...:|.|||.|:|.|:|||..|| :.|..|:|:...:.|.:.|:.|....|.:|.||..:..|.
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPIT 73

  Fly    70 NHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSL 134
            .:||:|.:|:..|.|.||:|||..|..:..||...:||..|.:.:|...|.|||...:||.||..
plant    74 KYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVA 138

  Fly   135 LICGWDNDR-PYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSED--LELDDAVHTAILTLK 196
            ::.|.|.:. |.||:.||:|.::..|||:.|........||||:..|:  ...|:.|.|||..|:
plant   139 MVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQ 203

  Fly   197 EGFEGKMTADNIEIGI--CDQNGFQRLDPASIKDYLASI 233
            ...:....|..||:|:  .:...|:.|....|:::|.:|
plant   204 SVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTAI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 80/230 (35%)
PAA1NP_198409.1 proteasome_alpha_type_6 8..220 CDD:239723 77/210 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.