DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and PAC1

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_188850.1 Gene:PAC1 / 821774 AraportID:AT3G22110 Length:250 Species:Arabidopsis thaliana


Alignment Length:211 Identity:81/211 - (38%)
Similarity:122/211 - (57%) Gaps:3/211 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYE-QHSVHRVE 66
            :.||....|.|||.|:|.|:|||:.|:.....::||::.:|||:..|.|..|.|.: ..|..::.
plant     2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMY 66

  Fly    67 MIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFG 131
            .|.:|:....:|:..|..:|:..||..||.|...|:||:||.||||.:....|.|||.||:||||
plant    67 KIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFG 131

  Fly   132 VSLLICGWDNDRPY-LYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTL 195
            ||.|..|||....: ||.|||||.|..|||.|:|.|....::.|::.|.:|...::||..|:..|
plant   132 VSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVL 196

  Fly   196 KEGFEG-KMTADNIEI 210
            .:..:. .:|::.:|:
plant   197 TKTMDSTSLTSEKLEL 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 80/208 (38%)
PAC1NP_188850.1 proteasome_alpha_type_4 3..215 CDD:239721 81/210 (39%)

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