DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and psma3

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001011257.1 Gene:psma3 / 496707 XenbaseID:XB-GENE-976787 Length:255 Species:Xenopus tropicalis


Alignment Length:238 Identity:76/238 - (31%)
Similarity:112/238 - (47%) Gaps:26/238 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYN 70
            |..|.:||||.|::.|:|||..||...:.::||...:|||...|....|.|||:.|..|:..:..
 Frog     8 YDLSASTFSPDGRVFQVEYAAKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNVDR 72

  Fly    71 HIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLL 135
            |:||..:|:..|.|.|...||:.|..:...|...||:..|..|||..:..||....|||||.|.:
 Frog    73 HVGMAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSFM 137

  Fly   136 ICGW-DNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDA----------VH 189
            :..: ::|...||..||||..:.:...|:||.....||.:||...:|:...|.          ||
 Frog   138 LGSYNEDDGAQLYMVDPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRDVVKEVAKIIYIVH 202

  Fly   190 TAI----LTLKEGFEGKMTADNIEIGICDQNGFQRLDPASIKD 228
            ..:    ..|:..:.||:|           ||...:.|..|::
 Frog   203 DEVKDKSFELELSWVGKIT-----------NGKHEIVPKDIRE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 76/238 (32%)
psma3NP_001011257.1 proteasome_alpha_type_3 5..217 CDD:239720 69/208 (33%)

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