DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Prosalpha1

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster


Alignment Length:228 Identity:70/228 - (30%)
Similarity:121/228 - (53%) Gaps:4/228 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTTFSPSGKLVQLEYALAAVS-GGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIG 73
            :|.|||.|:|.|:|||..|:: ....:|.:.:.:..|:||:.|.........:|..:..|...||
  Fly    13 ITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIG 77

  Fly    74 MVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICG 138
            ...:|...|.|..|::||..|..:...|...:||..|.:|:|.:.|.|||:..:||.|.|:::..
  Fly    78 CAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIA 142

  Fly   139 WDND-RPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGFEGK 202
            :||: .|.:|::||:|.:..:||.::|...:...::|||:|..:|..:.|:..||..|.......
  Fly   143 YDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAID 207

  Fly   203 MTADNIEIGICDQNG--FQRLDPASIKDYLASI 233
            ...:.||||:..::.  |:.||...|:::|..|
  Fly   208 FKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 68/224 (30%)
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 70/228 (31%)
proteasome_alpha_type_6 8..218 CDD:239723 64/204 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441017
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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