DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and psma8

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_998331.1 Gene:psma8 / 406445 ZFINID:ZDB-GENE-040426-2194 Length:251 Species:Danio rerio


Alignment Length:235 Identity:93/235 - (39%)
Similarity:142/235 - (60%) Gaps:10/235 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIY 69
            ||..::|.|||.|.|.|:|||..||..|:.:|||...:.||:..|.|..:.|.|:.:|.::..:.
Zfish     4 RYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALD 68

  Fly    70 NHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSL 134
            .|:.|.::|:..|.|:::.:||...|::.||.::|:.|..:.:.:|||.|.||||.|.||||:|.
Zfish    69 EHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISA 133

  Fly   135 LICGWDND-RPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSED--LELDDAVHTAILTLK 196
            ||.|:|.| .|.|||:||||.|.||||.|:|::|...:.||||.|:::  ...:||:..||..|.
Zfish   134 LIVGFDYDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALL 198

  Fly   197 EGFE--GKMTADNIEIGICDQN-GFQRLDPASIKDYLASI 233
            |..:  ||    |||:.:..:| ..:.|:...|:..:|.|
Zfish   199 EVVQSGGK----NIELAVIRRNQPLKILESKEIETLVAEI 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 90/230 (39%)
psma8NP_998331.1 proteasome_alpha_type_7 5..213 CDD:239724 87/211 (41%)

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