DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha2 and Prosbeta2R2

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster


Alignment Length:184 Identity:40/184 - (21%)
Similarity:80/184 - (43%) Gaps:8/184 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GAPSVGIIASNGVVIATENKHKS-PLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQ 95
            |...|||:...||:|..|::..| .:....:..::..:..:|....:|...|.:.||:..|...:
  Fly    49 GTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLE 113

  Fly    96 TYYL-TYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWK 159
            .:.: |....:||....|.:..|:..:  :|.:   ...::|.|.||...:|:.:...|:.....
  Fly   114 LHRMNTGFRKVPVCCANQMIRQLLFRF--NGNI---DADMIIGGADNTGAHLFCTRSDGSTDTAP 173

  Fly   160 ATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGFEGKMTADNIEIGIC 213
            .|::|.......:.||.|:||||..:.|...|...:..|.:..:.:.. ::.:|
  Fly   174 FTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGG-KVSLC 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 40/184 (22%)
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 39/183 (21%)

Return to query results.
Submit another query.