DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and psma6

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_989113.1 Gene:psma6 / 394718 XenbaseID:XB-GENE-943786 Length:246 Species:Xenopus tropicalis


Alignment Length:230 Identity:73/230 - (31%)
Similarity:118/230 - (51%) Gaps:6/230 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTTFSPSGKLVQLEYALAAVS-GGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIG 73
            :|.|||.|:|.|:|||..|:: ||..||.:...:..|:.|:.|....|.:.::|..:..|...||
 Frog    13 ITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKLLDSNTVTHLFRITESIG 77

  Fly    74 MVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICG 138
            .|.:||..|.|..|::||..|..:...|...|||..|.:|:|.:.|.|||:..:||.|..:::.|
 Frog    78 CVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIG 142

  Fly   139 WDNDR-PYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLE--LDDAVHTAILTLKEGFE 200
            .|.:. |.:::.||:|.|..:|||..|.......:||||:..:.|:  .:..:.|||..|.....
 Frog   143 VDEENGPQVFKCDPAGYYCGFKATTAGVKQTEATSFLEKKVKKKLDWTYEQTLETAISCLSTVLS 207

  Fly   201 GKMTADNIEIGI--CDQNGFQRLDPASIKDYLASI 233
            .......:|:|:  .:...|:.|..|.|..:|.::
 Frog   208 IDFKPSELEVGVVTVEDPKFRVLTEAEIDVHLVAL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 72/226 (32%)
psma6NP_989113.1 proteasome_alpha_type_6 8..220 CDD:239723 68/206 (33%)

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