DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Prosalpha3

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster


Alignment Length:235 Identity:92/235 - (39%)
Similarity:126/235 - (53%) Gaps:16/235 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIY 69
            ||....|.|||.|:|.|:|||:.|:|.....:||:|.:|:::|.|.:..:.|.:  |....|.||
  Fly     4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLD--SAIPSEKIY 66

  Fly    70 N-HIGMVYS--GMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFG 131
            . :..||.|  |:..|..:|..:.|.|||.|..:|.|.||..|||..:..:.|.|||.||.||||
  Fly    67 RLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFG 131

  Fly   132 VSLLICGWDNDRPY-LYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSE----DLELDDAVHTA 191
            ||||..||||...| ||||||||.|..||||.:|.|.....:.|::..::    .|.|.||...|
  Fly   132 VSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLA 196

  Fly   192 ILTLKEGFE-GKMTADNIEIGICDQNGFQRLDPASIKDYL 230
            |..|....: .|:|.:.:|:..     .||:|..::...|
  Fly   197 IKVLSMTLDTTKLTPEKVEMAT-----LQRVDNKTVYSVL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 91/234 (39%)
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 92/235 (39%)
proteasome_alpha_type_4 3..219 CDD:239721 88/221 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441062
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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