DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:214 Identity:67/214 - (31%)
Similarity:113/214 - (52%) Gaps:14/214 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIAT---ENKHKSPLYEQHSV 62
            |...:|....||:||.|:|.|:|||:.||..||.:||:..::..|:|.   .:|..:.|  |..:
  Fly     1 MFRNQYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSKDTNTL--QRKI 63

  Fly    63 HRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGV 127
            ..|:   :|:||..:|:..|.|::.:..|.....|..:|....||.:||..:...:|..||....
  Fly    64 MPVD---DHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDR 125

  Fly   128 RPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYS--EDLELDDAVHT 190
            ||:||.||:.|:|...|::||..|:......||.|:|..:.:.:|:||:...  ||.::|:.:..
  Fly   126 RPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICH 190

  Fly   191 AILTLKEGFEGKMTADNIE 209
            ||    :...|.:.:|::|
  Fly   191 AI----QAIRGSLGSDDVE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 66/209 (32%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 66/209 (32%)

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