DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Prosalpha6T

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:214 Identity:67/214 - (31%)
Similarity:113/214 - (52%) Gaps:14/214 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIAT---ENKHKSPLYEQHSV 62
            |...:|....||:||.|:|.|:|||:.||..||.:||:..::..|:|.   .:|..:.|  |..:
  Fly     1 MFRNQYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSKDTNTL--QRKI 63

  Fly    63 HRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGV 127
            ..|:   :|:||..:|:..|.|::.:..|.....|..:|....||.:||..:...:|..||....
  Fly    64 MPVD---DHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDR 125

  Fly   128 RPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYS--EDLELDDAVHT 190
            ||:||.||:.|:|...|::||..|:......||.|:|..:.:.:|:||:...  ||.::|:.:..
  Fly   126 RPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICH 190

  Fly   191 AILTLKEGFEGKMTADNIE 209
            ||    :...|.:.:|::|
  Fly   191 AI----QAIRGSLGSDDVE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 66/209 (32%)
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 66/211 (31%)
proteasome_alpha_type_1 6..215 CDD:239718 66/209 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441060
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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