DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Psma7

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001008218.1 Gene:Psma7 / 29674 RGDID:61851 Length:248 Species:Rattus norvegicus


Alignment Length:236 Identity:90/236 - (38%)
Similarity:141/236 - (59%) Gaps:14/236 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYN 70
            |..::|.|||.|.|.|:|||..||..|:.:||:...:.||:..|.|..:.|.::.:|.::..:.:
  Rat     3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDD 67

  Fly    71 HIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLL 135
            ::.|.::|:..|.|:::.:||...|::.||.::|:.|..:.:.:|:|.|.||||.|.||||:|.|
  Rat    68 NVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISAL 132

  Fly   136 ICGWDND-RPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGF 199
            |.|:|.| .|.|||:||||.|.||||.|:|:.|.:.:.||||.|:     |||:.|..||:|...
  Rat   133 IVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT-----DDAIETDDLTIKLVI 192

  Fly   200 EGKMT-----ADNIEIGIC--DQNGFQRLDPASIKDYLASI 233
            :..:.     ..|||:.:.  || ..:.|.|..|:.|:|.|
  Rat   193 KALLEVVQSGGKNIELAVMRRDQ-PLKILSPEEIEKYVAEI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 88/232 (38%)
Psma7NP_001008218.1 PRK03996 1..230 CDD:235192 88/232 (38%)
proteasome_alpha_type_7 3..211 CDD:239724 82/212 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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