DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Psma1

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_036095.1 Gene:Psma1 / 26440 MGIID:1347005 Length:263 Species:Mus musculus


Alignment Length:237 Identity:76/237 - (32%)
Similarity:130/237 - (54%) Gaps:11/237 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV 65
            |...:|...:|.:||.|::.|:|||:.||..|:.:||:.:....|:....:.:|.|    :.|:.
Mouse     1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL----AAHQK 61

  Fly    66 EMIY--NHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVR 128
            ::::  ||||:..:|:..|.|||....|:........:..|:|||:||..:.:..|..||..|.|
Mouse    62 KILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRR 126

  Fly   129 PFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLE--LDDAVHTA 191
            |:||.|||.|:|:..|:::|:.||..||..:|.::|..:.:.:|:||:..||.:|  ||:.|...
Mouse   127 PYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHG 191

  Fly   192 ILTLKEGF--EGKMTADNIEIGICDQN-GFQRLDPASIKDYL 230
            :..|:|..  |..:|..|:.|||..:: .|...|...:..:|
Mouse   192 LRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 75/232 (32%)
Psma1NP_036095.1 proteasome_alpha_type_1 6..216 CDD:239718 72/213 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 1/2 (50%)

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