DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and pre8

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_588320.1 Gene:pre8 / 2539026 PomBaseID:SPCC1442.06 Length:245 Species:Schizosaccharomyces pombe


Alignment Length:244 Identity:145/244 - (59%)
Similarity:176/244 - (72%) Gaps:13/244 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEM 67
            |::|:||||||||:|||||:||||.||:.|..||||.|::|||:|||.|..|.|....|:.:|..
pombe     2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCA 66

  Fly    68 IYNHIGMVYSGMGPDYRLLVKQARKIAQ-TYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFG 131
            |...|||||||||||:|:||.::||:|| ||...|.|..|...|||.:|::|||.||||||||||
pombe    67 ITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFG 131

  Fly   132 VSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLK 196
            ||||:.|.|...|.|||.||||.||||||||:||::...||||||||:::||||||||||||.||
pombe   132 VSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALK 196

  Fly   197 EGFEGKMTADNIEI----------GICDQNG--FQRLDPASIKDYLASI 233
            |.|||::|.|||||          ||....|  |.||..:.|:|||..:
pombe   197 ETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIRDYLDQV 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 143/237 (60%)
pre8NP_588320.1 proteasome_alpha_type_2 5..243 CDD:239719 143/237 (60%)
PRK03996 10..245 CDD:235192 140/234 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 216 1.000 Domainoid score I574
eggNOG 1 0.900 - - E1_KOG0181
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2081
Inparanoid 1 1.050 264 1.000 Inparanoid score I738
OMA 1 1.010 - - QHG54016
OrthoFinder 1 1.000 - - FOG0003690
OrthoInspector 1 1.000 - - oto100575
orthoMCL 1 0.900 - - OOG6_101969
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1004
SonicParanoid 1 1.000 - - X2555
TreeFam 1 0.960 - -
1413.860

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