DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and pas-1

DIOPT Version :9

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_506571.1 Gene:pas-1 / 179941 WormBaseID:WBGene00003922 Length:246 Species:Caenorhabditis elegans


Alignment Length:230 Identity:64/230 - (27%)
Similarity:117/230 - (50%) Gaps:6/230 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTTFSPSGKLVQLEYALAAV-SGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIG 73
            :|.|||.|::.|:|||..|: |....:|.:..::..|||.:.:....|....:|..|..|...:|
 Worm    13 ITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVG 77

  Fly    74 MVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICG 138
            ....||.||.:..:|:|:..|.::.......:|...|.:::|.|.|.|||:..:|..|.:||...
 Worm    78 CCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFIS 142

  Fly   139 WDNDR-PYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLEL--DDAVHTAILTLKEGFE 200
            :|::: |.:|:.||:|.|...|..::|...:...:||||:..:..||  .:|:..||..|:....
 Worm   143 YDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLG 207

  Fly   201 GKMTADNIEIGIC--DQNGFQRLDPASIKDYLASI 233
            ..:.:.::|:.:.  |.:.|.:|....::.:|..|
 Worm   208 IDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 62/226 (27%)
pas-1NP_506571.1 PRE1 7..245 CDD:223711 64/230 (28%)
proteasome_alpha_type_6 8..220 CDD:239723 59/206 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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