DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and pas-7

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:210 Identity:63/210 - (30%)
Similarity:104/210 - (49%) Gaps:7/210 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYN 70
            |..:.:||||.|::.|:|||..||......:.|...||||:..:....|.||..::..|:..:.:
 Worm     8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVND 72

  Fly    71 HIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLL 135
            ::|:..:|..||...|...|...|..:...|:||:|:..:...||..:..:| .|..||||....
 Worm    73 NVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAF 136

  Fly   136 ICGWDNDR-PYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTA---ILTLK 196
            ...|:... ..|:..:|||..:.:||.|:||:....|..:||...|:|:::..|..|   |:.::
 Worm   137 FMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEAARIIMVVR 201

  Fly   197 EGFEGKMTADNIEIG 211
            :  |.|.....||:|
 Worm   202 D--ENKDKNVQIEMG 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 63/210 (30%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 63/210 (30%)

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