DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and zmp:0000001228

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_073800154.1 Gene:zmp:0000001228 / 797319 ZFINID:ZDB-GENE-140106-188 Length:388 Species:Danio rerio


Alignment Length:490 Identity:163/490 - (33%)
Similarity:232/490 - (47%) Gaps:107/490 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DQRPVKDEPPQEDTFEEELIFISNSDFEELESEIKIENFCSYGKDLEPVKGVPSKLKTCKSKIAK 71
            |..|.:.:|  |||.::..:...|...:|.|..:|:|.               ..||...|.|  
Zfish     3 DPEPCRIKP--EDTEQQIDLIEENVASKEEEHHVKVEE---------------KYLKIHMSMI-- 48

  Fly    72 KRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHEKRP 136
                .....:..||||.|:|::..||..|:::|..|:||.|:.|.||                  
Zfish    49 ----HTGEKSLTCTQCGKSFSQLSNLNKHMKIHTGEKPFTCTQCGKS------------------ 91

  Fly   137 HKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKA 201
                     |.|:|||..|:..||||:||.||||..||.:.|.|.:|:|.|:.|:||.||.|.|:
Zfish    92 ---------FIQSSSLNLHMMIHTGEKPFTCTQCGKSFIQSSSLNLHMRIHTGEKPFRCTQCGKS 147

  Fly   202 FKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQI 265
            |..:|.|..|:|.|...:||.|:.|.|||...|.|.:|:..| .|:.|.|.||.|:|.|:.:|..
Zfish   148 FSQSSSLNLHMRIHTGKKPFTCTQCGKSFNQSSNLNQHMKIHTGEKPFTCIQCGKSFSQSSNLNH 212

  Fly   266 HLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRER 330
            |:|:|.||.||.|..|.:.|:::|.|.||:..|.|::|.:|:||..:|...|.:.:|::.||..|
Zfish   213 HMRIHTGEKPFTCTRCGKGFSQSSSLNLHMRIHTGEKPFRCTQCGKSFGRSSQHDIHMKSHTGVR 277

  Fly   331 QYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSK 395
            :|.|.||.|:|.....|..||:.|.||:|:||:||.|.|....||:                   
Zfish   278 EYVCFECEKTFITSGELKLHQRNHAGEKPYKCSHCDKRFNQSEHLK------------------- 323

  Fly   396 EFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQ 460
                                                 .|.||||||.|:.||||:|.|::....:
Zfish   324 -------------------------------------RHERTHTGEKPYMCSHCNKRFSQLPHLK 351

  Fly   461 EHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLRRTL 495
            .|.|.|||||||:|..|...:.....|.:|:.:.|
Zfish   352 THERIHTGEKPYRCDQCLQSFAHLVQLKKHMDQKL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 144/404 (36%)
C2H2 Zn finger 84..104 CDD:275368 9/19 (47%)
C2H2 Zn finger 112..132 CDD:275368 4/19 (21%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 10/19 (53%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 0/19 (0%)
C2H2 Zn finger 418..438 CDD:275368 2/19 (11%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368 4/17 (24%)
zmp:0000001228XP_073800154.1 None

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